functional_connectivity

class brainpy.measure.functional_connectivity(activities, numpy=True)

Functional connectivity matrix of timeseries activities.

Parameters:

• activities (ndarray) – The multidimensional array with the shape of (num_time, num_sample).

• numpy (bool) – Whether we use numpy array as the functional output. If False, this function can be JIT compiled.

Returns:

connectivity_matrix – num_sample x num_sample functional connectivity matrix.

Return type:

ndarray